CDS

Accession Number TCMCG081C21776
gbkey CDS
Protein Id XP_002265386.1
Location complement(join(5298240..5298308,5298669..5298837,5298914..5299017,5299251..5299340,5299445..5299513,5306086..5306219,5306304..5306394,5306513..5306593,5306990..5307115,5307202..5307358,5307466..5307560,5307705..5307764,5308619..5308699,5309460..5309654,5309863..5310993))
Gene LOC100244754
GeneID 100244754
Organism Vitis vinifera

Protein

Length 883aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002265350.3
Definition PREDICTED: DNA topoisomerase 1 alpha isoform X1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category L
Description dna topoisomerase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K03163        [VIEW IN KEGG]
EC 5.99.1.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003917        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0031298        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAATAAGCAATTGATCAATCCTCCTGTTGCAAATGGTGAGTCTGAGGATTCTGAAGATGATAAACCATTGAGTGCCAAACTTTCTGCACGATTACCAAAGGGCAATTCCCATGTTTTAAAGGGACTTAGTTCCCCGGTATTACAGTCACAAAAGACTAAGGTTGATGTCAAGAAGTCTGATGGTGATTCGGAAGATGAAGTTCCTTTGTCATCAAAATTCCCATTGAAAACCTATGTGAGGTCTTCTTCTGGAAAGTCACTTGGTTCAAAGGGACTTAATTCACCTTCTCTTAGCTCACATCCTCCAGAGACGAAGGTTGGCGTCAAGGAGTCCTCTGATGATTCAGAAGATGAAATTCCTTTGTTATTAAAGTTACAATTGAAATCCAGGAAAGGGGCATCTTCAAGCAAGTTGCTTGACTCAAAGGGGCTCAGTTCACCTGCTTCTAGCCGGCCACAATCTCAGAAGGCTAAGGTCAACAACAAGAACCTTTCTGATGATTCAGAAGATGAAATCCCTTTGTCATCAAAATTCCGATTGAAAACTGGTATGGGGGCATCTTTGGATAAACTGGATAACTTTGATGAGAAGAAGCCCTTGACTTCTACACTGAAACCCAATGGCATCAGTAAGAAAGATGATGAACGGGTAAAATCTCCCAAAGGTCAGAACAAGAGGCCTCTAGGTCAGGCGAATACTTCACACCATTCTTCATCTAAAAAACCAAAGCTTTTGGATGGATCTGTTAAAGGCAAAGTAAAGCAAGTATCTGTGAAAGCAGAGCAAAAGGATGACGATGACGACGACAACGATGATGATGATGAGTATACTCCTACTGTCAAGAGACTGAAGAAGTCAGTTTCCTCAGATAATAAAAAAGCATCGAAAACAAAAGTTATCCCCTCATCACGAAAGAAGGCAACCAAGAAAGCCAAGAAATCCAAGAAATTGGCAAAGAGTTCAAAATACTCCAAGTCAACAAAAGTACCTCCCAACTCTGGTGAAGGACAGAAGTGGACTACATTGGAGCACAATGGGGTTATTTTTCCACCTCCCTACAAGCCTCATGGAGTTAAAATGCTCTACAATGGTCGCCCAGTTGATTTGACTCCTGAACAGGAGGAGGTTGCAACAATGTTTGCAGTAATGAAAGATACAGACTATGCAACCAAACCGAGATTTATAGAGAACTTCATGAATGATTGGAGAGTGAGACTTGGAAAAAATCATGTAATTAAGAAGTTTGAACTTTGTGATTTCACTCCAATATATGAATGGCATGAGAAGGAAAAGGAGAAGAAAAAGCAAATGACTACAGAAGAGAAGAAGGCCTTAAAAGAAGAGAAATTGAAACAAGAAGACAAGTATATGTGGGCTGTTGTTGACGGTGTCAAAGAAAAGGTTGGAAATTTCAGAGTAGAACCACCTGGGTTGTTCCGTGGTCGTGGGGAGCATCCAAAGATGGGAAAGCTGAAAAAACGCATTTGTCCAAGTGATATTACAATAAATATTGGAAAGGAAGCCCCTGTTCCAGAATGTCCTATTCCTGGTGAAAGGTGGAAGGAAGTCAGGCATGACAATACCGTTACATGGTTAGCATTTTGGAATGATCCTATCAATCCAAAAGAATTCAAATATGTCTTTCTGGCAGCCAGCAGTTCCTTGAAAGGACAAAGTGACAAGGAGAAATATGAAAAAGCAAGGTTGCTGAAGGACTATATACAAAATATCAGAGCAACCTACACAAAGGATTTCACGAATAAAGATACTATGAAGCGGCAAATTGCAGTTGCTACATATCTCATTGACAAGCTGGCTCTCAGGGCTGGCAATGAGAAGGATGATGATGAGGCTGATACGGTTGGTTGTTGCACCTTGAAAGTGGAAAATGTTGCATTAGTTCCTCCAAACAAGTTGGAGTTTGATTTTCTCGGTAAGGATTCCATTAGATACTTCAACACCGTTGAAGTTGAGCTTCCTGTGTATAAAGCTATTGGGCAATTCAAGACTGGTAAAAGTGGTGGGGATGATCTTTTTGACAAGCTGGATACAAGTAAGCTGAATGCTCACTTGAAGGAACTCATGCCTGGCCTCACTGCAAAAGTTTTCCGTACATATAATGCATCTATCACTTTGGATGAGATGTTGAATAGAGAAGCCAGGGGTGGGGATGCAATGGAGAAGATTGTCATTTATCAGCATGCAAACAAAGAGGTTGCCATTATATGCAACCATCAACGTAGTGTCTCAAAGTCCCATGACGTACAAATGTCAAGGTTGAGTGAGAAGATGAGGGAGCTTCAGGGTGTTTTGGATGAATTGAAAACAGACTTGGCGAGGGCAAAGAAAGGGAAGCCTCCATTGAAGGATTCTGATGGGAAGCCAAAGAAGAACATGACCCCAGAAGTGTTAGAGAGGAAGATTGCCCAAACCAATACAAAGATTGAGAAAATGGAGCGAGATATGAAAACCAAAGAGGATCTAAAGACAGTAGCATTGGGCACCTCAAAGATCAATTATCTTGATCCCAGAATATCAGTTGCATGGTGCAAACGCCAGGAAGTTCCAATTGAGAAGATATTCAATAAATCTCTTCTGGCAAAGTTTGCTTGGGCAATGGATGTTGATCCGAGTTTCAGATTCTGA
Protein:  
MENKQLINPPVANGESEDSEDDKPLSAKLSARLPKGNSHVLKGLSSPVLQSQKTKVDVKKSDGDSEDEVPLSSKFPLKTYVRSSSGKSLGSKGLNSPSLSSHPPETKVGVKESSDDSEDEIPLLLKLQLKSRKGASSSKLLDSKGLSSPASSRPQSQKAKVNNKNLSDDSEDEIPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQANTSHHSSSKKPKLLDGSVKGKVKQVSVKAEQKDDDDDDNDDDDEYTPTVKRLKKSVSSDNKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIFPPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKNHVIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEKLKQEDKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQRSVSKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERKIAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFAWAMDVDPSFRF